The detailed information of tRNA gene sequence


Sequence ID>WENV170012051
Genome IDAPMI01115172
Search identical group
Phylum/Class[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
Species
Start position on genome 1449
End posion on genome 1525
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
atataactat
tRNA gene sequence 
GCCCTGATAGCTCAGATGGATAGAGCAGAGGACTTCTAAGCCTAAGGCCGTTGGTTCGAG
TCCAACTCGGGGCACCA
Downstream region at tRNA end position 
tgcaatgagt
Secondary structure (Cloverleaf model)
>WENV170012051	Arg	TCT
                   t      ACCA tgcaatgagt
                     G - C
                     C - G
                     C - G
                     C - G
                     T + G
                     G - C
                     A - T          T G
                    T     C A A C C     A
      A G A        A      | | | | |     G
    T       C T C G       G T T G G     C
    G       | | | |                 T T
    G       G A G C
      A T A        A     AGGCC
                    G   A
                    A - T
                    G - C
                    G - C
                    A   G
                  C       A
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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