The detailed information of tRNA gene sequence


Sequence ID>WENV170012052
Genome IDAPMI01115265
Search identical group
Phylum/Class[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
Species
Start position on genome 35
End posion on genome 122
Amino Acid Ser
Anticodon AGA
Upstream region at tRNA start position 
cccgatcaat
tRNA gene sequence 
GGAGAGGTGCCGGAGCGGCCAGTCGGCGTATGTTAGAAGCATGATGGGCGGCAACGCCGC
GCGAGTTCACATCTCGCCTTCTCCGCCA
Downstream region at tRNA end position 
ttcttggatg
Secondary structure (Cloverleaf model)
>WENV170012052	Ser	AGA
                   t      GCCA ttcttggatg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G + T
                     G - C          T A
                    T     C G C T C     C
      C G A        G      | | | | |     A
    G       G G C C       G C G A G     C
    G       + | | |                 T T
    C       T C G G
      C A G        C     TGGGCGGCAACGCCGC
                    G   A
                    T + G
                    A - T
                    T - A
                    G - C
                  T       G
                  T       A
                    A G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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