The detailed information of tRNA gene sequence


Sequence ID>WENV170012062
Genome IDAPMI01115916
Search identical group
Phylum/Class[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
Species
Start position on genome 708
End posion on genome 632
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
gtggccctgc
tRNA gene sequence 
CCGCCAGTAGCTCAGGCGGATAGAGCAGCTGCCTTCTAAGCAGCCGGCCGGGGGTTCGAG
TCCTCCCTGGCGCGCCA
Downstream region at tRNA end position 
gaatttcaag
Secondary structure (Cloverleaf model)
>WENV170012062	Arg	TCT
                   c      GCCA gaatttcaag
                     C   C
                     C - G
                     G - C
                     C - G
                     C - G
                     A - T
                     G - C          T G
                    T     C C T C C     A
      G G A        A      | | + | |     G
    C       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      A T A        A     CGGCC
                    G - C
                    C - G
                    T - A
                    G - C
                    C - G
                  C       A
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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