The detailed information of tRNA gene sequence


Sequence ID>WENV170012079
Genome IDAPMI01117803
Search identical group
Phylum/Class[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
Species
Start position on genome 1375
End posion on genome 1301
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
ctgccccagt
tRNA gene sequence 
GGCCCCTTCGTCTAGCGGTCAGGACGCGGCCCTCTCACGGCTGAAACACGAGTTCGATTC
TCGTAGGGGTCACCA
Downstream region at tRNA end position 
tagagttcgg
Secondary structure (Cloverleaf model)
>WENV170012079	Glu	CTC
                   t      ACCA tagagttcgg
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     C - G
                     T - A          T T
                    T     T G C T C     A
      C G A        C      | | | | |     G
    G       T C T G       A C G A G     C
    G       + | | |                 T T
    T       G G A C
      C A          G     AAAC
                    C - G
                    G + T
                    G - C
                    C - G
                    C - G
                  C       C
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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