The detailed information of tRNA gene sequence


Sequence ID>WENV170012098
Genome IDAPMI01119990
Search identical group
Phylum/Class[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
Species
Start position on genome 1470
End posion on genome 1545
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
caatgttacc
tRNA gene sequence 
GGGCTGGTAGCTCAATGGTTAGAGCCGACCGCTCATAACGGTCTGGTTGGGGGTTCGAGT
CCCTCCCGGCCCACCA
Downstream region at tRNA end position 
cccactcttc
Secondary structure (Cloverleaf model)
>WENV170012098	Met	CAT
                   c      ACCA cccactcttc
                     G - C
                     G - C
                     G - C
                     C - G
                     T + G
                     G - C
                     G - C          T G
                    T     C T C C C     A
      T A A        A      | + | | |     G
    G       C T C G       G G G G G     C
    G       | | | |                 T T
    T       G A G C
      T A          C     TGGTT
                    G - C
                    A - T
                    C - G
                    C - G
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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