The detailed information of tRNA gene sequence


Sequence ID>WENV170012113
Genome IDAPMI01121175
Search identical group
Phylum/Class[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
Species
Start position on genome 220
End posion on genome 146
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
ttccaaatag
tRNA gene sequence 
AAAGCGTGAGTTCAGCAGGAAGAATACCGCCATGTCGCGGCGGAGGTCGTGGGTTCGAGT
CCCACACGCTTTCCAa
Downstream region at tRNA end position 
aacggagata
Secondary structure (Cloverleaf model)
>WENV170012113	Asp	GTC
                   g      CCAa aacggagata
                     A - T
                     A - T
                     A - T
                     G - C
                     C - G
                     G - C
                     T - A          T G
                    G     C A C C C     A
      C G A        A      | | | | |     G
    A       C T T G       G T G G G     C
    G       | | | +                 T T
    G       G A A T
      A A          A     AGGTC
                    C - G
                    C - G
                    G - C
                    C - G
                    C - G
                  A       C
                  T       G
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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