The detailed information of tRNA gene sequence


Sequence ID>WENV170012118
Genome IDAPMI01121628
Search identical group
Phylum/Class[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
Species
Start position on genome 797
End posion on genome 725
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tctcatacga
tRNA gene sequence 
TGCGGGGTAGAGCAGTGGAAGCTCGTCGGGCTCATAACCCGGAGGTCGCAGGTTCGAGTC
CTGTCCCCGCTACtc
Downstream region at tRNA end position 
atggtgatat
Secondary structure (Cloverleaf model)
>WENV170012118	Met	CAT
                   a      ACtc atggtgatat
                     T   T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T G
                    T     T G T C C     A
        G A        A      + | | | |     G
      T     C G A G       G C A G G     C
      G     | | | |                 T T
      G     G C T C
        A A        G     AGGTC
                    T + G
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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