The detailed information of tRNA gene sequence


Sequence ID>WENV170012123
Genome IDAPMI01122359
Search identical group
Phylum/Class[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
Species
Start position on genome 1538
End posion on genome 1456
Amino Acid Leu
Anticodon TAG
Upstream region at tRNA start position 
cacaaaattt
tRNA gene sequence 
GGGGATGTGGCGTAATTGGCAGCCGCGCATGCCTTAGGAGCATGTGGAGTAATCCGTGTG
GGTTCAAGTCCCACCGTCCCCACtt
Downstream region at tRNA end position 
acagatcgtg
Secondary structure (Cloverleaf model)
>WENV170012123	Leu	TAG
                   t      ACtt acagatcgtg
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T
                     T + G
                     G - C          T G
                    T     C A C C C     A
      T A A        G      | | | | |     A
    T       T G C G       G T G G G     C
    G         | | |                 T T
    G       C C G C
      C A G        G     TGGAGTAATCCGT
                    C - G
                    A - T
                    T - A
                    G - C
                    C - G
                  C       A
                  T       G
                    T A G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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