The detailed information of tRNA gene sequence


Sequence ID>WENV170012131
Genome IDAPMI01123612
Search identical group
Phylum/Class[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
Species
Start position on genome 1096
End posion on genome 1181
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
gtcattttaa
tRNA gene sequence 
GGAGGGGTAGCCTAGTGGCCTAAGGCGCTCGCCTGGAACGCGGGTAAGGGTAACACCTTC
GTGGGTTCAAATCCCACCTCCTCCGCtc
Downstream region at tRNA end position 
ttttccacat
Secondary structure (Cloverleaf model)
>WENV170012131	Ser	GGA
                   a      GCtc ttttccacat
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G + T
                     G - C          T A
                    T     C A C C C     A
      T G A        A      | | | | |     A
    G       T C C G       G T G G G     C
    G       | | | |                 T T
    C       A G G C
      C T A        G     TAAGGGTAACACCTTC
                    C - G
                    T + G
                    C - G
                    G - C
                    C - G
                  C       C
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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