The detailed information of tRNA gene sequence


Sequence ID>WENV170012133
Genome IDAPMI01124293
Search identical group
Phylum/Class[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
Species
Start position on genome 716
End posion on genome 640
Amino Acid His
Anticodon GTG
Upstream region at tRNA start position 
ccaaaacacg
tRNA gene sequence 
GAGGTTGTAGCTCAGTCGGTTAGAGCGTCGGATTGTGGTTCCGAAGGCCGTGGGTTCGAA
CCCCATCTTCCTCCCTA
Downstream region at tRNA end position 
aaaaatccca
Secondary structure (Cloverleaf model)
>WENV170012133	His	GTG
                   g      CCTA aaaaatccca
                     G - C
                     A - T
                     G - C
                     G - C
                     T   T
                     T   T
                     G - C          C A
                    T     T A C C C     A
      T G A        A      + | | | |     G
    C       C T C G       G T G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGCC
                    T - A
                    C - G
                    G - C
                    G - C
                    A - T
                  T       T
                  T       G
                    G T G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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