The detailed information of tRNA gene sequence


Sequence ID>WENV170012142
Genome IDAPMI01126096
Search identical group
Phylum/Class[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
Species
Start position on genome 3977
End posion on genome 4067
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
tcattatcca
tRNA gene sequence 
GGAGGGATGGCCGAGTGGCTTAAGGCGCTGGTCTTGAAAACCTGTGTGTCGAATTTCGGC
ACCGTGGGTTCGAATCCCACTCCCTCCGCCT
Downstream region at tRNA end position 
ggtaacaatt
Secondary structure (Cloverleaf model)
>WENV170012142	Ser	TGA
                   a      GCCT ggtaacaatt
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G T G G G     C
    G         | | |                 T T
    C       A G G C
      T T A        G     TGTGTCGAATTTCGGCACC
                    C - G
                    T   T
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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