The detailed information of tRNA gene sequence


Sequence ID>WENV170012157
Genome IDAPMI01127834
Search identical group
Phylum/Class[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
Species
Start position on genome 76
End posion on genome 1
Amino Acid Ala
Anticodon CGC
Upstream region at tRNA start position 
tgcccacgtc
tRNA gene sequence 
GGGGGGGTAGCTCAGCTGGGAGAGCGCCGCGTTCGCAATGCGGAGGTCGTGAGTTCGATC
CTCATCCTCTCCACCA
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>WENV170012157	Ala	CGC
                   c      ACCA nnnnnnnnnn
                     G - C
                     G - C
                     G + T
                     G - C
                     G + T
                     G - C
                     G - C          C T
                    T     T A C T C     A
      C G A        A      + | | | |     G
    T       C T C G       G T G A G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    C - G
                    C - G
                    G - C
                    C - G
                    G + T
                  T       A
                  T       A
                    C G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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