The detailed information of tRNA gene sequence


Sequence ID>WENV170012159
Genome IDAPMI01128366
Search identical group
Phylum/Class[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
Species
Start position on genome 309
End posion on genome 234
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
caaccggagc
tRNA gene sequence 
GGGGCCGTAGCTCAGTTGGGAGAGCGCCTGATTTGCATTCAGGAGGTCGTCGGTTCGACT
CCGATCGGCTCCACCA
Downstream region at tRNA end position 
gtcgggagcc
Secondary structure (Cloverleaf model)
>WENV170012159	Ala	TGC
                   c      ACCA gtcgggagcc
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     C - G
                     G - C          T C
                    T     T A G C C     A
      T G A        A      + | | | |     G
    T       C T C G       G T C G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    A - T
                  T       T
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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