The detailed information of tRNA gene sequence


Sequence ID>WENV170012171
Genome IDAPMI01130275
Search identical group
Phylum/Class[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
Species
Start position on genome 986
End posion on genome 912
Amino Acid Phe
Anticodon AAA
Upstream region at tRNA start position 
tattaagtca
tRNA gene sequence 
GTCAGCTTAGCTCAATCGGGAGAGCGCCGGCCTAAAAATCCGGAGGTTTATGGGTTCGAA
TCCCATAGTTGACACtt
Downstream region at tRNA end position 
ttttattatt
Secondary structure (Cloverleaf model)
>WENV170012171	Phe	AAA
                   a      ACtt ttttattatt
                     G - C
                     T - A
                     C - G
                     A - T
                     G + T
                     C - G
                     T - A          T A
                    T     T A C C C     A
      T A A        A      | | | | |     G
    C       C T C G       A T G G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTTT
                    C - G
                    C - G
                    G - C
                    G - C
                    C   T
                  C       A
                  T       A
                    A A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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