The detailed information of tRNA gene sequence


Sequence ID>WENV170012181
Genome IDAPMI01131724
Search identical group
Phylum/Class[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
Species
Start position on genome 153
End posion on genome 77
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ccaaaacgat
tRNA gene sequence 
GGCGGGGTAGCTCAGATGGTTAGAGCGTAGGATTCATAACCCTAAGGTCGGCAGTTCGAT
CCTGCTCCCCGCTACAA
Downstream region at tRNA end position 
atagcaagcc
Secondary structure (Cloverleaf model)
>WENV170012181	Met	CAT
                   t      ACAA atagcaagcc
                     G + T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          C T
                    T     T C G T C     A
      A G A        A      + | | | |     G
    T       C T C G       G G C A G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    T - A
                    A - T
                    G - C
                    G - C
                    A   C
                  T       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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