The detailed information of tRNA gene sequence


Sequence ID>WENV170012189
Genome IDAPMI01133002
Search identical group
Phylum/Class[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
Species
Start position on genome 1333
End posion on genome 1418
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
tatgccgccg
tRNA gene sequence 
GGAGGGCTCGCATAGTGGACTAGTGCGGCGGTCTTGAAAACCGCTAAGGCGAAAGCCTTC
GTGGGTTCGAATCCCACGCCCTCCGCtc
Downstream region at tRNA end position 
gctgacgctc
Secondary structure (Cloverleaf model)
>WENV170012189	Ser	TGA
                   g      GCtc gctgacgctc
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     C - G          T A
                    T     C A C C C     A
      T G A        C      | | | | |     G
    G       T A C G       G T G G G     C
    G       + | | |                 T T
    A       G T G C
      C T A        G     TAAGGCGAAAGCCTTC
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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