The detailed information of tRNA gene sequence


Sequence ID>WENV170012215
Genome IDAPMI01137544
Search identical group
Phylum/Class[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
Species
Start position on genome 161
End posion on genome 237
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
ggttcttttg
tRNA gene sequence 
CGGGACGTGGTGCAGCCTGGAAGCATTCCGGCGTCGGAAGCCGGAGGTCGCACGTTCAAA
TCGTGCCGTCCCGACCA
Downstream region at tRNA end position 
tcgacgagcg
Secondary structure (Cloverleaf model)
>WENV170012215	Pro	CGG
                   g      ACCA tcgacgagcg
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T
                     C - G
                     G - C          T A
                    T     C G T G C     A
      C G A        G      | | | | |     A
    C       C G T G       G C A C G     C
    T       | | | +                 T T
    G       G C A T
      G A A        T     AGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  G       A
                  T       A
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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