The detailed information of tRNA gene sequence


Sequence ID>WENV170012221
Genome IDAPMI01137544
Search identical group
Phylum/Class[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
Species
Start position on genome 1331
End posion on genome 1416
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
attccatgcG
tRNA gene sequence 
GAAAGGCTAGCCGACTGGTGACGGCAGCGCGGTGCTAACGCGTCGAGCGCAAGCCTTGTG
GGTTCAACTCCCACCCTTTCCGCC
Downstream region at tRNA end position 
Ataccgtcag
Secondary structure (Cloverleaf model)
>WENV170012221	Ser	GCT
                   G      CGCC Ataccgtcag
                     G - C
                     A - T
                     A - T
                     A - T
                     G - C
                     G - C
                     C   C          C A
                    T     A C C C T     A
      T C A        A      | |   | +     C
    G       G C C G       T G T G G     T
    G       | | | |                 G T
    T       C G G C
      G A          A     CGAGCGCAAGCCT
                    G + T
                    C - G
                    G - C
                    C - G
                    G - C
                  G       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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