The detailed information of tRNA gene sequence


Sequence ID>WENV170012225
Genome IDAPMI01138568
Search identical group
Phylum/Class[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
Species
Start position on genome 2138
End posion on genome 2065
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
cctcctcaat
tRNA gene sequence 
GCCTCCGTAGCTCAGGGGATAGAGCAGCGGTCTTCTAAACCGTTGGTCGGGAGTTCGAAT
CTCTCCGGGGGCGCac
Downstream region at tRNA end position 
tgggagatgt
Secondary structure (Cloverleaf model)
>WENV170012225	Arg	TCT
                   t      GCac tgggagatgt
                     G - C
                     C - G
                     C - G
                     T + G
                     C - G
                     C - G
                     G - C          T A
                    T     C T C T C     A
      G G A        A      | + | | |     G
    G       C T C G       G G G A G     C
    G       | | | |                 T T
    A       G A G C
      T A          A     TGGTC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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