The detailed information of tRNA gene sequence


Sequence ID>WENV170012227
Genome IDAPMI01138768
Search identical group
Phylum/Class[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
Species
Start position on genome 528
End posion on genome 454
Amino Acid His
Anticodon GTG
Upstream region at tRNA start position 
cccccttacg
tRNA gene sequence 
GAGGCTGTAGCTCAGTTGGTTAGAGCATCAGATTGTGGTTCTGAGGGTCGTGGGTTCGAG
ACCCATCAGCCTCCCtt
Downstream region at tRNA end position 
caacaacaaa
Secondary structure (Cloverleaf model)
>WENV170012227	His	GTG
                   g      CCtt caacaacaaa
                     G - C
                     A - T
                     G - C
                     G - C
                     C - G
                     T - A
                     G - C          A G
                    T     T A C C C     A
      T G A        A      + | | | |     G
    T       C T C G       G T G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GGGTC
                    T - A
                    C - G
                    A - T
                    G - C
                    A - T
                  T       T
                  T       G
                    G T G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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