The detailed information of tRNA gene sequence


Sequence ID>WENV170012228
Genome IDAPMI01139062
Search identical group
Phylum/Class[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
Species
Start position on genome 389
End posion on genome 305
Amino Acid Leu
Anticodon TAG
Upstream region at tRNA start position 
caatttttgc
tRNA gene sequence 
GGGGATGTGGCGGAATTGGCATACGCGCATGACTTAGGATCATGTGGTTCACACCTTGCG
GGTTCGAGTCCCGCCATCCCCACCT
Downstream region at tRNA end position 
cattgccgag
Secondary structure (Cloverleaf model)
>WENV170012228	Leu	TAG
                   c      ACCT cattgccgag
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T
                     T - A
                     G - C          T G
                    T     C G C C C     A
      T A A        G      | | | | |     G
    T       G G C G       G C G G G     C
    G         | | |                 T T
    G       A C G C
      C A T        G     TGGTTCACACCTT
                    C - G
                    A - T
                    T - A
                    G - C
                    A - T
                  C       A
                  T       G
                    T A G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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