The detailed information of tRNA gene sequence


Sequence ID>WENV170012252
Genome IDAPMI01142991
Search identical group
Phylum/Class[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
Species
Start position on genome 1730
End posion on genome 1803
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
cacgtcagtt
tRNA gene sequence 
GATCTGTTCGTCTAACAGGTGAGGACGCAAGATTTTCATTCTTGTAATACGGGTTCGACT
CCCGTACAGATTACat
Downstream region at tRNA end position 
ggttcgttgg
Secondary structure (Cloverleaf model)
>WENV170012252	Glu	TTC
                   t      ACat ggttcgttgg
                     G + T
                     A - T
                     T - A
                     C - G
                     T - A
                     G - C
                     T - A          T C
                    T     T G C C C     A
      C A A        C      | | | | |     G
    A       T C T G       A C G G G     C
    G       + | | |                 T T
    G       G G A C
      T G A        G     TAAT
                    C - G
                    A - T
                    A - T
                    G - C
                    A - T
                  T       T
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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