The detailed information of tRNA gene sequence


Sequence ID>WENV170012255
Genome IDAPMI01142991
Search identical group
Phylum/Class[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
Species
Start position on genome 2405
End posion on genome 2499
Amino Acid Asn
Anticodon GTT
Upstream region at tRNA start position 
aggactcaat
tRNA gene sequence 
GGATGAAAAGCTCAAAGGCTGAGCAGCGGTTTGTTAAGCCGTTGGTTGAAGGCCTGCCGG
CAGGCAGGCAGGTTCGATTCCTTCTTCATCCGCAA
Downstream region at tRNA end position 
tgtgagtgcg
Secondary structure (Cloverleaf model)
>WENV170012255	Asn	GTT
                   t      GCAA tgtgagtgcg
                     G - C
                     G - C
                     A - T
                     T - A
                     G - C
                     A - T
                     A - T          T T
                    A     C T T C C     A
        A A        A      |   | | |     G
      A     C T C G       G C A G G     C
      G     | | | |                 T T
      G     G A G C
        C T        A     TGGTTGAAGGCCTGCCGGCAGGCAG
                    G + T
                    C - G
                    G - C
                    G - C
                    T + G
                  T       A
                  T       A
                    G T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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