The detailed information of tRNA gene sequence


Sequence ID>WENV170012259
Genome IDAPMI01143263
Search identical group
Phylum/Class[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
Species
Start position on genome 522
End posion on genome 604
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
aatatttata
tRNA gene sequence 
GAGTAGTTGGCTGAGTTGGTAAGGCGGTGTCTTGCTAAGACATTGTTCGTTAGAACACAC
AGGTTCGAGTCCTGTACTACTCAggt
Downstream region at tRNA end position 
tttgcggatg
Secondary structure (Cloverleaf model)
>WENV170012259	Ser	GCT
                   a      Aggt tttgcggatg
                     G - C
                     A - T
                     G - C
                     T - A
                     A - T
                     G - C
                     T - A          T G
                    T     T G T C C     A
      T G A        G      | | | | |     G
    T       G T C G       A C A G G     C
    G         + | |                 T T
    G       A G G C
      T A          G     TGTTCGTTAGAACAC
                    G + T
                    T - A
                    G - C
                    T - A
                    C - G
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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