The detailed information of tRNA gene sequence


Sequence ID>WENV170012264
Genome IDAPMI01143351
Search identical group
Phylum/Class[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
Species
Start position on genome 1280
End posion on genome 1355
Amino Acid Thr
Anticodon CGT
Upstream region at tRNA start position 
attcggcagg
tRNA gene sequence 
GCCGGCATAGCTCAGTTGGTAGAGCAGCGCATTCGTAATGCGAAGGTCGGGGGTTCGACT
CCTCTTGCCGGCACCA
Downstream region at tRNA end position 
atcaaatcga
Secondary structure (Cloverleaf model)
>WENV170012264	Thr	CGT
                   g      ACCA atcaaatcga
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     C - G
                     A - T          T C
                    T     T C T C C     A
      T G A        A      + | + | |     G
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     AGGTC
                    G   A
                    C - G
                    G - C
                    C - G
                    A - T
                  T       A
                  T       A
                    C G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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