The detailed information of tRNA gene sequence


Sequence ID>WENV170012270
Genome IDAPMI01143946
Search identical group
Phylum/Class[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
Species
Start position on genome 129
End posion on genome 54
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
taaagtagcA
tRNA gene sequence 
GGCGGTATAGCCAAGTTGGTAAGGCAAAGGATTGCAAATTCTTGATTACCTCAGTTCAAG
TCTGAGTGCCGCCTTtt
Downstream region at tRNA end position 
ttataaaaaa
Secondary structure (Cloverleaf model)
>WENV170012270	Cys	GCA
                   A      TTtt ttataaaaaa
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C
                     T + G
                     A - T          T G
                    T     G A G T C     A
      T G A        A      | | | | |     A
    T       A C C G       C T C A G     C
    G         | | |                 T T
    G       A G G C
      T A          A     GATTAC
                    A - T
                    A - T
                    G - C
                    G + T
                    A - T
                  T       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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