The detailed information of tRNA gene sequence


Sequence ID>WENV170012282
Genome IDAPMI01146074
Search identical group
Phylum/Class[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
Species
Start position on genome 682
End posion on genome 608
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
gtttcatttt
tRNA gene sequence 
CGGGATGTAGCGCAGCCCGGTAGCGCGCTTCGTTCGGGACGAAGAGGCCGCTGGTTCGAA
TCCAGTCATCCCGACtt
Downstream region at tRNA end position 
cacgggacaa
Secondary structure (Cloverleaf model)
>WENV170012282	Pro	CGG
                   t      ACtt cacgggacaa
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T
                     T - A
                     G - C          T A
                    T     T G A C C     A
      C G A        A      + | | | |     G
    C       C G C G       G C T G G     C
    C       | | | |                 T T
    G       G C G C
      G T A        G     AGGCC
                    C - G
                    T - A
                    T - A
                    C - G
                    G - C
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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