The detailed information of tRNA gene sequence


Sequence ID>WENV170012295
Genome IDAPMI01148511
Search identical group
Phylum/Class[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
Species
Start position on genome 1256
End posion on genome 1160
Amino Acid Lys
Anticodon TTT
Upstream region at tRNA start position 
gcccgcaagg
tRNA gene sequence 
GAGCGCGTAGCTCAGTCGGTAGAGCATCTGACTTTTAATCAGAGGGTCCTGACTTTTAAT
CAGAGGGTCCTGGGTTCGAGTCCCAGCGCGCTCACCA
Downstream region at tRNA end position 
tcatacccgc
Secondary structure (Cloverleaf model)
>WENV170012295	Lys	TTT
                   g      ACCA tcatacccgc
                     G - C
                     A - T
                     G - C
                     C - G
                     G - C
                     C - G
                     G - C          T G
                    T     G A C C C     A
      T G A        A      | | | | |     G
    C       C T C G       C T G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GGGTCCTGACTTTTAATCAGAGGGTC
                    T - A
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    T T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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