The detailed information of tRNA gene sequence


Sequence ID>WENV170012305
Genome IDAPMI01150118
Search identical group
Phylum/Class[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
Species
Start position on genome 1430
End posion on genome 1356
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ctgcatatag
tRNA gene sequence 
CGCGGGGTAGAGCAGTGGCAGCTCGTCGGGCTCATAACCCGGAGGTCGGGGGTTCGAATC
CCTCCCCCGCAACAA
Downstream region at tRNA end position 
attgaaagcc
Secondary structure (Cloverleaf model)
>WENV170012305	Met	CAT
                   g      ACAA attgaaagcc
                     C   A
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C T C C C     A
        G A        A      | + | | |     G
      T     C G A G       G G G G G     C
      G     | | | |                 T T
      G     G C T C
        C A        G     AGGTC
                    T + G
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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