The detailed information of tRNA gene sequence


Sequence ID>WENV170012309
Genome IDAPMI01150501
Search identical group
Phylum/Class[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
Species
Start position on genome 762
End posion on genome 667
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
gacggcttga
tRNA gene sequence 
GGAAGAGAATCGTCCCCGGTGGGGCGTCCGGACTTCAAATCCGGGAGGGGCCGCAAGACG
GTCTTTGGTGGGTTCGACTCCCTCTCTCTTCCGCCA
Downstream region at tRNA end position 
ctccttcagc
Secondary structure (Cloverleaf model)
>WENV170012309	SeC(p)	TCA
                   a      GCCA ctccttcagc
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T C
                    A     C T C C C     A
      C C C        T      |   | | |     G
    G       C T G C       G T G G G     C
    G       | + | |                 T T
    T       G G C G
      G G          T     GAGGGGCCGCAAGACGGTCTTTG
                    C - G
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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