The detailed information of tRNA gene sequence


Sequence ID>WENV170012316
Genome IDAPMI01152593
Search identical group
Phylum/Class[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
Species
Start position on genome 133
End posion on genome 58
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
aatccaatat
tRNA gene sequence 
CGCGGGATGGAGCAGTAGGTAGCTCGTCGGGCTCATAACCCGAAGGTCATCGGTTCGAGT
CCGGTTCCCGCTACTA
Downstream region at tRNA end position 
agtaaacgtt
Secondary structure (Cloverleaf model)
>WENV170012316	Met	CAT
                   t      ACTA agtaaacgtt
                     C   T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T          T G
                    T     T G G C C     A
      T G A        G      | + | | |     G
    A       C G A G       A T C G G     C
    G       | | | |                 T T
    G       G C T C
      T A          G     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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