The detailed information of tRNA gene sequence


Sequence ID>WENV170012321
Genome IDAPMI01153573
Search identical group
Phylum/Class[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
Species
Start position on genome 222
End posion on genome 148
Amino Acid Gln
Anticodon CTG
Upstream region at tRNA start position 
cataccccct
tRNA gene sequence 
TGGGGTATAGTGTAATTGGCAACACTAGTGATTCTGGTTCACTCATTCTAGGTTCGAGTC
CTGGTACCCCAGCCA
Downstream region at tRNA end position 
gtcgatccgg
Secondary structure (Cloverleaf model)
>WENV170012321	Gln	CTG
                   t      GCCA gtcgatccgg
                     T - A
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     A - T          T G
                    T     G G T C C     A
      T A A        A      | + | | |     G
    T       T G T G       C T A G G     C
    G       | | | |                 T T
    G       A C A C
      C A          T     CATT
                    A - T
                    G - C
                    T - A
                    G - C
                    A - T
                  T       T
                  T       G
                    C T G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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