The detailed information of tRNA gene sequence


Sequence ID>WENV170012332
Genome IDAPMI01155079
Search identical group
Phylum/Class[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
Species
Start position on genome 1162
End posion on genome 1077
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tgataaaaga
tRNA gene sequence 
GGAGAAATGACTGAGTGGTCGAAAGTAGCGCATTGCTAATGCGTCGTATGTAAAGCATAC
CGAGGGTTCGAATCCCTCTTTCTCCGttt
Downstream region at tRNA end position 
attaattcaa
Secondary structure (Cloverleaf model)
>WENV170012332	Ser	GCT
                   a      Gttt attaattcaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     A - T
                     A - T          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G T C A       G A G G G     C
    G         | | |                 T T
    T       A A G T
      C G A        A     CGTATGTAAAGCATACC
                    G + T
                    C - G
                    G - C
                    C - G
                    A - T
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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