The detailed information of tRNA gene sequence


Sequence ID>WENV170012339
Genome IDAPMI01157497
Search identical group
Phylum/Class[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
Species
Start position on genome 100
End posion on genome 185
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
gctcgtacgc
tRNA gene sequence 
GGAGGGTTGTCCGAGCGGCCGAAGGAACTAGTCTTGAAAACTAGCAGGTGAAAGCCTCAG
GGGTTCAAATCCCCTACCCTCCGCCG
Downstream region at tRNA end position 
caggtgcccg
Secondary structure (Cloverleaf model)
>WENV170012339	Ser	TGA
                   c      GCCG caggtgcccg
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     T - A          T A
                    T     T C C C C     A
      C G A        G      | | | | |     A
    G       G C C T       A G G G G     C
    G         | | |                 T T
    C       A G G A
      C G A        A     CAGGTGAAAGCCTC
                    C - G
                    T - A
                    A - T
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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