The detailed information of tRNA gene sequence


Sequence ID>WENV170012367
Genome IDAPMI01162179
Search identical group
Phylum/Class[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
Species
Start position on genome 3053
End posion on genome 3130
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
ataattttat
tRNA gene sequence 
CCGGGTGTGGCTCAGTCTGGCTAGAGCGATCCGTTTGGGGCGGATAGGTCGCAGGTTCGA
ATCCTGCTACCCGGACCA
Downstream region at tRNA end position 
attttctgag
Secondary structure (Cloverleaf model)
>WENV170012367	Pro	TGG
                   t      ACCA attttctgag
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C
                     T - A
                     G + T          T A
                    T     C G T C C     A
    C T G A        G      | | | | |     G
  T         C T C G       G C A G G     C
  G         | | | |                 T T
  G         G A G C
    C T A          G     AGGTC
                    A - T
                    T - A
                    C - G
                    C - G
                    G - C
                  T       G
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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