The detailed information of tRNA gene sequence


Sequence ID>WENV170012368
Genome IDAPMI01162943
Search identical group
Phylum/Class[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
Species
Start position on genome 262
End posion on genome 189
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
gcggccaagc
tRNA gene sequence 
GGGCGATTAGCTCAGTTGGTTAGAGCATCCCTCTGATAAGGGGAAGGTCTCAGGTTCAAC
TCCTGAATCGCCCAtct
Downstream region at tRNA end position 
cgcgcgaggg
Secondary structure (Cloverleaf model)
>WENV170012368	Ile	GAT
                   c      Atct cgcgcgaggg
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     A - T
                     T - A          T C
                    T     A G T C C     A
      T G A        A      | | | | |     A
    T       C T C G       T C A G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     AGGTC
                    T - A
                    C - G
                    C - G
                    C - G
                    T + G
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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