The detailed information of tRNA gene sequence


Sequence ID>WENV170012399
Genome IDAPMI01168349
Search identical group
Phylum/Class[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
Species
Start position on genome 323
End posion on genome 234
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
catatcgatt
tRNA gene sequence 
GGGGAGGTGCCAGAGTGGTCGATTGGGATCGCCTGCTAAGCGATTTCGCGGTTTAACCCG
CGACAAGGGTTCGAATCCCTTCCTTCCCGCac
Downstream region at tRNA end position 
ttacaaaaaa
Secondary structure (Cloverleaf model)
>WENV170012399	Ser	GCT
                   t      GCac ttacaaaaaa
                     G - C
                     G - C
                     G - C
                     G + T
                     A - T
                     G - C
                     G - C          T A
                    T     T T C C C     A
      T G A        G      | | | | |     G
    G       G A C C       A A G G G     C
    G       + | | |                 T T
    T       T T G G
      C G A        G     TTCGCGGTTTAACCCGCGAC
                    A - T
                    T - A
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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