The detailed information of tRNA gene sequence


Sequence ID>WENV170012405
Genome IDAPMI01169571
Search identical group
Phylum/Class[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
Species
Start position on genome 277
End posion on genome 202
Amino Acid Thr
Anticodon CGT
Upstream region at tRNA start position 
gccttggttt
tRNA gene sequence 
GCCGCTTTAGCTCAGTTGGTAGAGCAGTTCATTCGTAATGAAAAGGTCGCCAGTTCGATT
CCGGCAAGCGGCACCA
Downstream region at tRNA end position 
cagttcattc
Secondary structure (Cloverleaf model)
>WENV170012405	Thr	CGT
                   t      ACCA cagttcattc
                     G - C
                     C - G
                     C - G
                     G - C
                     C - G
                     T - A
                     T - A          T T
                    T     C G G C C     A
      T G A        A      | | |   |     G
    T       C T C G       G C C A G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     AGGTC
                    G   A
                    T - A
                    T - A
                    C - G
                    A - T
                  T       A
                  T       A
                    C G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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