The detailed information of tRNA gene sequence


Sequence ID>WENV170012407
Genome IDAPMI01169728
Search identical group
Phylum/Class[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
Species
Start position on genome 102
End posion on genome 178
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
ctcttccagt
tRNA gene sequence 
CGGGGCGTAGCGCAGCCTGGTAGCGCACCTGCCTTGGGCGCAGGGGGCCGTGAGTTCAAA
TCTCGCCGCCCCGACCA
Downstream region at tRNA end position 
attactctcc
Secondary structure (Cloverleaf model)
>WENV170012407	Pro	TGG
                   t      ACCA attactctcc
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     C G C T C     A
      C G A        A      | + | | |     A
    C       C G C G       G T G A G     C
    T       | | | |                 T T
    G       G C G C
      G T A        A     GGGCC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       C
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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