The detailed information of tRNA gene sequence


Sequence ID>WENV170012414
Genome IDAPMI01171102
Search identical group
Phylum/Class[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
Species
Start position on genome 456
End posion on genome 383
Amino Acid Lys
Anticodon CTT
Upstream region at tRNA start position 
aaaaataaat
tRNA gene sequence 
GTCTTCGTAGCTCAGTTGGTAGAGCAGCTGACTCTTAATCAGCGGGCCTAGGGTTCGAGT
CCCTACGAGGACACtt
Downstream region at tRNA end position 
aaaaatcaag
Secondary structure (Cloverleaf model)
>WENV170012414	Lys	CTT
                   t      ACtt aaaaatcaag
                     G - C
                     T - A
                     C - G
                     T + G
                     T - A
                     C - G
                     G - C          T G
                    T     A T C C C     A
      T G A        A      | | | | |     G
    T       C T C G       T A G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GGGCC
                    G - C
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    C T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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