The detailed information of tRNA gene sequence


Sequence ID>WENV170012477
Genome IDASRK01002225
Search identical group
Phylum/Class[ASRK] bioreactor metagenome; day 48 sample from continuous culture bioreactor inoculated with sediment from the German Wadden
Species
Start position on genome 882
End posion on genome 795
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
agagctttaa
tRNA gene sequence 
GGAGAAGTACCCAAGTGGCTGAAGGGTCCGCACTCGAAATGCGGTAGGTCGTTTACGCGG
CGCGGGGGTTCAAATCCCTCCTTCTCTGttg
Downstream region at tRNA end position 
aacgcttatg
Secondary structure (Cloverleaf model)
>WENV170012477	Ser	CGA
                   a      Gttg aacgcttatg
                     G + T
                     G - C
                     A - T
                     G - C
                     A - T
                     A - T
                     G - C          T A
                    T     C T C C C     A
      T G A        A      | + | | |     A
    G       A C C C       G G G G G     C
    G         | | |                 T T
    C       A G G G
      T G A        T     TAGGTCGTTTACGCGGCGC
                    C - G
                    C - G
                    G - C
                    C - G
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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