The detailed information of tRNA gene sequence


Sequence ID>WENV170012601
Genome IDASRM01001131
Search identical group
Phylum/Class[ASRM] bioreactor metagenome; day 74 sample from continuous culture bioreactor inoculated with sediment from the German Wadden
Species
Start position on genome 1509
End posion on genome 1433
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gtaatttaca
tRNA gene sequence 
GGGCCGTTAGCTCAGCTGGTTAGAGCAGTGGACTCATAATCCATTGGTCGCTGGTTCAAG
TCCAGCACGGCCCACCA
Downstream region at tRNA end position 
cttacccagc
Secondary structure (Cloverleaf model)
>WENV170012601	Met	CAT
                   a      ACCA cttacccagc
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     G - C
                     T - A          T G
                    T     C G A C C     A
      C G A        A      | | | | |     A
    T       C T C G       G C T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     TGGTC
                    G + T
                    T - A
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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