The detailed information of tRNA gene sequence


Sequence ID>WENV170012603
Genome IDASRM01001434
Search identical group
Phylum/Class[ASRM] bioreactor metagenome; day 74 sample from continuous culture bioreactor inoculated with sediment from the German Wadden
Species
Start position on genome 1387
End posion on genome 1474
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
attgagcagt
tRNA gene sequence 
GGTGAGATGGTCGAGTGGTCGAAGGCGCATGCCTGGAACGTATGTGTAGTTTATTCTACC
GAGGGTTCGAATCCCTCTCTCATCGCCA
Downstream region at tRNA end position 
tttataaaaa
Secondary structure (Cloverleaf model)
>WENV170012603	Ser	GGA
                   t      GCCA tttataaaaa
                     G - C
                     G + T
                     T - A
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C T G       G A G G G     C
    G         | + |                 T T
    T       A G G C
      C G A        G     TGTAGTTTATTCTACC
                    C - G
                    A - T
                    T - A
                    G + T
                    C - G
                  C       C
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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