The detailed information of tRNA gene sequence


Sequence ID>WENV170012647
Genome IDASRM01017686
Search identical group
Phylum/Class[ASRM] bioreactor metagenome; day 74 sample from continuous culture bioreactor inoculated with sediment from the German Wadden
Species
Start position on genome 233
End posion on genome 141
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
taaaaaatgt
tRNA gene sequence 
GGTGAGGTGGCCGAGAGGCTGAAGGCGCTCCCCTGCTAAGGGAGTATACGGTTTGTAGCC
GTATCGAGGGTTCGAATCCCTCCCTCACCGCCA
Downstream region at tRNA end position 
tttactggtt
Secondary structure (Cloverleaf model)
>WENV170012647	Ser	GCT
                   t      GCCA tttactggtt
                     G - C
                     G - C
                     T - A
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      A G A        G      | | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    C       A G G C
      T G A        G     TATACGGTTTGTAGCCGTATC
                    C - G
                    T - A
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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