The detailed information of tRNA gene sequence


Sequence ID>WENV170012760
Genome IDASRO01000114
Search identical group
Phylum/Class[ASRO] bioreactor metagenome; day 119 sample from continuous culture bioreactor inoculated with sediment from the German Wadden
Species
Start position on genome 176
End posion on genome 86
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
tagcgcgttT
tRNA gene sequence 
GGAGAAGTACCCAAGCGGCTGAAGGGGCTCGCCTGGAAAGTGAGTAGGTCGTTAATAGCG
GCGCGAGGGTTCAAATCCCTCCTTCTCCGTta
Downstream region at tRNA end position 
gtttttaaga
Secondary structure (Cloverleaf model)
>WENV170012760	Ser	GGA
                   T      GTta gtttttaaga
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     A - T
                     G - C          T A
                    T     C T C C C     A
      C G A        A      | | | | |     A
    G       A C C C       G A G G G     C
    G         | | |                 T T
    C       A G G G
      T G A        G     TAGGTCGTTAATAGCGGCGC
                    C - G
                    T - A
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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