The detailed information of tRNA gene sequence


Sequence ID>WENV170012835
Genome IDASRP01000558
Search identical group
Phylum/Class[ASRP] bioreactor metagenome; day 140 sample from continuous culture bioreactor inoculated with sediment from the German Wadden
Species
Start position on genome 14
End posion on genome 110
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
taattgcttt
tRNA gene sequence 
GGAAGTAGATAGGTAACTGGTGTGCCTACCGGTCTTCAAAACCGAGTTTTGGCGTTTGCT
CGTCATGGGTGGGTTCGATTCCCACATACTTCCGCCA
Downstream region at tRNA end position 
aatataaatt
Secondary structure (Cloverleaf model)
>WENV170012835	SeC(p)	TCA
                   t      GCCA aatataaatt
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     T - A
                     A - T
                     G   A          T T
                    A     C A C C C     A
      C A A        T      | | | | |     G
    T       T G G A       G T G G G     C
    G       + | | |                 T T
    G       G C C T
      T G T        A     GTTTTGGCGTTTGCTCGTCATGG
                    C   A
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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