The detailed information of tRNA gene sequence


Sequence ID>WENV170012936
Genome IDASRQ01000059
Search identical group
Phylum/Class[ASRQ] bioreactor metagenome; day 168 sample from continuous culture bioreactor inoculated with sediment from the German Wadden
Species
Start position on genome 27000
End posion on genome 27072
Amino Acid Thr
Anticodon CGT
Upstream region at tRNA start position 
tattaaagat
tRNA gene sequence 
GCTCCCATGGCTCAGTCGGTAGAGCGATTCACTCGTAATGAATAGGTCAGCGGTTCGATT
CCGCTTGGGAGCTttt
Downstream region at tRNA end position 
ttgtttatac
Secondary structure (Cloverleaf model)
>WENV170012936	Thr	CGT
                   t      Tttt ttgtttatac
                     G - C
                     C - G
                     T - A
                     C - G
                     C - G
                     C - G
                     A - T          T T
                    T     T C G C C     A
      T G A        G      | | | | |     G
    C       C T C G       A G C G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     AGGTC
                    A - T
                    T - A
                    T - A
                    C - G
                    A - T
                  C       A
                  T       A
                    C G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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