The detailed information of tRNA gene sequence


Sequence ID>WENV170012947
Genome IDASRQ01000148
Search identical group
Phylum/Class[ASRQ] bioreactor metagenome; day 168 sample from continuous culture bioreactor inoculated with sediment from the German Wadden
Species
Start position on genome 20543
End posion on genome 20633
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ctcaaatcaa
tRNA gene sequence 
GGACAGATGGGTGAGTTGGCTGAAACCACCTCCCTGCTAAGGAGACGTACTGGCAACGGT
ACCGAGGGTTCGAATCCCTCTCTGTCCGCCA
Downstream region at tRNA end position 
tttgtttcat
Secondary structure (Cloverleaf model)
>WENV170012947	Ser	GCT
                   a      GCCA tttgtttcat
                     G - C
                     G - C
                     A - T
                     C - G
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
    T T G A        G      | | | | |     G
  G         G T G G       G A G G G     C
  G           | | |                 T T
  C         A A C C
    T G A          A     CGTACTGGCAACGGTACC
                    C   A
                    C - G
                    T - A
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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