The detailed information of tRNA gene sequence


Sequence ID>WENV170012953
Genome IDASRQ01000211
Search identical group
Phylum/Class[ASRQ] bioreactor metagenome; day 168 sample from continuous culture bioreactor inoculated with sediment from the German Wadden
Species
Start position on genome 1351
End posion on genome 1438
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
tctcatttac
tRNA gene sequence 
GGACAGCTGGCTGAGTGGCCGAAAGCGCGCGCTTGGAAGGCGTGTATAGGGCAACCTATC
TAGGGTTCAAATCCCTAGCTGTCCGCCA
Downstream region at tRNA end position 
tttattcttt
Secondary structure (Cloverleaf model)
>WENV170012953	Ser	GGA
                   c      GCCA tttattcttt
                     G - C
                     G - C
                     A - T
                     C - G
                     A - T
                     G - C
                     C - G          T A
                    T     A T C C C     A
      T G A        G      | | | | |     A
    G       G T C G       T A G G G     C
    G         | | |                 T T
    C       A A G C
      C G A        G     TATAGGGCAACCTATC
                    C - G
                    G + T
                    C - G
                    G - C
                    C - G
                  T       G
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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