The detailed information of tRNA gene sequence


Sequence ID>WENV170012959
Genome IDASRQ01000295
Search identical group
Phylum/Class[ASRQ] bioreactor metagenome; day 168 sample from continuous culture bioreactor inoculated with sediment from the German Wadden
Species
Start position on genome 4081
End posion on genome 4006
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
ccactttttt
tRNA gene sequence 
GGAGGTATAGCAAAGTTGGTAATGCCCGGGATTGCAAATCCTGTATGCGTCGGTTCGAGT
CCGGCTACCTCCTCCA
Downstream region at tRNA end position 
ctaatttcaa
Secondary structure (Cloverleaf model)
>WENV170012959	Cys	GCA
                   t      TCCA ctaatttcaa
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     T - A
                     A - T          T G
                    T     C G G C C     A
      T G A        A      | + | | |     G
    T       A A C G       G T C G G     C
    G         | | |                 T T
    G       A T G C
      T A          C     TATGC
                    C - G
                    G + T
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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